STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZK1IP1PDZK1 interacting protein 1. (115 aa)    
Predicted Functional Partners:
SLC5A2
Solute carrier family 5 member 2; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
    
 
 0.909
ENSSTOP00000024537
PDZ domain-containing protein.
    
 
 0.725
SLC5A1
Solute carrier family 5 member 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
    
   0.709
SLC5A4
Solute carrier family 5 member 4; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
    
   0.709
LOC101966927
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
    
   0.641
Pkd1l2
Uncharacterized protein.
      
 0.606
SYS1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
      
 0.555
TMEM223
Transmembrane protein 223.
      
 0.483
SLC5A8
Solute carrier family 5 member 8; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
   
 
 0.442
Tmbim4
Uncharacterized protein; Belongs to the BI1 family.
      
 0.439
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.