STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALPK3Alpha kinase 3. (1652 aa)    
Predicted Functional Partners:
CCDC174
Coiled-coil domain containing 174.
   
  
 0.604
OBSL1
Obscurin like 1.
   
  
 0.597
MSS51
MSS51 mitochondrial translational activator.
      
 0.583
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.554
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.554
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.554
ENSSTOP00000030497
SER_THR_PHOSPHATASE domain-containing protein.
    
  0.554
GALE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.503
GBA2
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
    
  0.489
Bod1
Uncharacterized protein.
     
 0.481
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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