STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM124AFamily with sequence similarity 124 member A. (527 aa)    
Predicted Functional Partners:
HABP2
Hyaluronan binding protein 2.
  
 0.694
CCDC157
Coiled-coil domain containing 157.
   
    0.614
FAM167B
Family with sequence similarity 167 member B.
      
 0.594
VTN
SMB domain-containing protein.
   
 0.588
I3MBK1_ICTTR
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 0.539
HGFAC
HGF activator.
  
 0.539
ATP6AP2
ATPase H+ transporting accessory protein 2.
   
 0.442
HPX
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
   
 0.433
Col22a1
VWFA domain-containing protein.
    
 0.429
AGTR1
Angiotensin II receptor type 1; Belongs to the G-protein coupled receptor 1 family.
    
  0.423
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.