STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA7ASemaphorin 7A (John Milton Hagen blood group); Belongs to the semaphorin family. (664 aa)    
Predicted Functional Partners:
PLXNC1
Plexin C1.
    
 0.997
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
     
 0.933
PLXNA1
Plexin A1.
    
 0.886
PLXND1
Plexin D1.
    
 0.875
PLXNA4
Plexin A4.
    
 0.871
PLXNA2
Plexin A2.
    
0.866
PLXNA3
Plexin A3.
    
0.848
PLXNB1
Plexin B1.
    
 0.801
ITGB2
Integrin beta.
     
 0.800
ITGB7
Integrin beta; Belongs to the integrin beta chain family.
     
 0.800
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.