STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3MZU0_ICTTRLipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (138 aa)    
Predicted Functional Partners:
CDC73
Cell division cycle 73.
    
 0.720
C8B
Complement C8 beta chain.
   
 0.691
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.676
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.667
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.667
HAMP
Hepcidin antimicrobial peptide.
   
 
 0.599
C6
Complement C6.
   
  0.574
C7
Complement C7.
   
  0.574
DAB1
DAB adaptor protein 1.
   
 0.556
DAB2
DAB adaptor protein 2.
   
 0.556
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.