STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3MZY4_ICTTRUncharacterized protein. (356 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
   
 0.968
VCL
Vinculin.
    
0.946
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.924
I3N3K3_ICTTR
Uncharacterized protein.
 
      0.899
JUP
Junction plakoglobin.
   
 0.881
AFDN
Afadin, adherens junction formation factor.
    
 0.862
ACTN1
Actinin alpha 1.
   
 0.847
ACTN4
Actinin alpha 4.
   
 0.847
CTNND1
Catenin delta 1.
   
 0.838
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
    
 0.827
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.