STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3N055_ICTTRCobl domain-containing protein. (335 aa)    
Predicted Functional Partners:
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3.
    
 
 0.856
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
    
 
 0.842
PACSIN1
Protein kinase C and casein kinase substrate in neurons 1.
    
 
 0.840
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.640
ACTA2
Actin alpha 2, smooth muscle.
    
 
 0.567
ACTL10
Actin like 10; Belongs to the actin family.
    
 
 0.567
ACTA1
Actin alpha 1, skeletal muscle.
    
 
 0.567
ACTC1
Actin alpha cardiac muscle 1.
    
 
 0.567
Cd47
Uncharacterized protein.
    
  0.534
PALM3
Paralemmin 3.
    
 0.532
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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