STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hint1HIT domain-containing protein. (127 aa)    
Predicted Functional Partners:
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
    
 0.850
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.798
TBP
TATA-box binding protein.
   
 0.718
TBPL2
TATA-box binding protein like 2.
   
 0.718
ATP5MF
ATP synthase membrane subunit f.
   
   0.705
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.669
SUOX
Sulfite oxidase.
  
  0.665
MNAT1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
    
 0.651
UBTF
Upstream binding transcription factor.
    
 0.649
TBPL1
TATA-box binding protein like 1.
   
 0.643
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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