STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101954983Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
  
 0.983
Slc3a2
Uncharacterized protein.
  
 0.855
ENSSTOP00000029438
annotation not available
  
 0.855
SLC7A9
Solute carrier family 7 member 9.
  
  
 
0.840
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
   
 0.744
KIAA0513
KIAA0513.
   
 0.744
NUDT12
Nudix hydrolase 12.
   
  0.650
QRSL1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
   
 0.572
MST1R
Macrophage stimulating 1 receptor.
    
  0.562
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.562
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.