TBX19 protein (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

TBX19

T-box transcription factor 19. (446 aa)

Predicted Functional Partners:

GATA3

0.709

GATA2

0.709

EOMES

0.670

NOTO

0.667

SNAI1

0.611

TBX10

0.586

TBR1

0.586

RUNX1

0.582

RUNX3

0.582

RUNX2

0.582

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EOMES	GATA3	ENSSTOP00000019007	ENSSTOP00000000959	Eomesodermin.	GATA binding protein 3.	0.569
EOMES	RUNX1	ENSSTOP00000019007	ENSSTOP00000017745	Eomesodermin.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.518
EOMES	RUNX2	ENSSTOP00000019007	ENSSTOP00000029414	Eomesodermin.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.476
EOMES	RUNX3	ENSSTOP00000019007	ENSSTOP00000024287	Eomesodermin.	RUNX family transcription factor 3.	0.518
EOMES	SNAI1	ENSSTOP00000019007	ENSSTOP00000005237	Eomesodermin.	Snail family transcriptional repressor 1.	0.637
EOMES	TBX19	ENSSTOP00000019007	ENSSTOP00000018162	Eomesodermin.	T-box transcription factor 19.	0.670
GATA2	GATA3	ENSSTOP00000005494	ENSSTOP00000000959	GATA binding protein 2.	GATA binding protein 3.	0.426
GATA2	RUNX1	ENSSTOP00000005494	ENSSTOP00000017745	GATA binding protein 2.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.733
GATA2	RUNX2	ENSSTOP00000005494	ENSSTOP00000029414	GATA binding protein 2.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.733
GATA2	RUNX3	ENSSTOP00000005494	ENSSTOP00000024287	GATA binding protein 2.	RUNX family transcription factor 3.	0.733
GATA2	TBX19	ENSSTOP00000005494	ENSSTOP00000018162	GATA binding protein 2.	T-box transcription factor 19.	0.709
GATA3	EOMES	ENSSTOP00000000959	ENSSTOP00000019007	GATA binding protein 3.	Eomesodermin.	0.569
GATA3	GATA2	ENSSTOP00000000959	ENSSTOP00000005494	GATA binding protein 3.	GATA binding protein 2.	0.426
GATA3	RUNX1	ENSSTOP00000000959	ENSSTOP00000017745	GATA binding protein 3.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.720
GATA3	RUNX2	ENSSTOP00000000959	ENSSTOP00000029414	GATA binding protein 3.	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	0.720
GATA3	RUNX3	ENSSTOP00000000959	ENSSTOP00000024287	GATA binding protein 3.	RUNX family transcription factor 3.	0.764
GATA3	TBX19	ENSSTOP00000000959	ENSSTOP00000018162	GATA binding protein 3.	T-box transcription factor 19.	0.709
NOTO	TBX19	ENSSTOP00000016957	ENSSTOP00000018162	Notochord homeobox.	T-box transcription factor 19.	0.667
RUNX1	EOMES	ENSSTOP00000017745	ENSSTOP00000019007	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	Eomesodermin.	0.518
RUNX1	GATA2	ENSSTOP00000017745	ENSSTOP00000005494	Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX.	GATA binding protein 2.	0.733