STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF4C1q and TNF related 4. (328 aa)    
Predicted Functional Partners:
Ankrd24-2
ANK_REP_REGION domain-containing protein.
    
 
 0.641
TEP1
Telomerase associated protein 1.
    
 0.571
I3M5T4_ICTTR
DUF4062 domain-containing protein.
    
 0.569
C1QC
Complement C1q C chain.
    
 
0.538
PLA2G4A
Phospholipase A2.
     
 0.536
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
    
  0.482
SETDB1
SET domain bifurcated histone lysine methyltransferase 1.
    
  0.482
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.467
Muc17
Uncharacterized protein.
  
 
  0.452
POT1
Protection of telomeres 1.
    
  0.430
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.