STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCANVersican. (2402 aa)    
Predicted Functional Partners:
TNC
Tenascin C.
   
 0.763
BCAN
Brevican.
   
 
0.750
TNR
Tenascin R.
   
 0.742
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
0.725
FBLN1
Fibulin 1.
    
 0.691
NCAM2
Uncharacterized protein.
    
 0.690
Ncam2
Uncharacterized protein.
    
 0.690
NCAM1
Neural cell adhesion molecule 1.
    
 0.690
FBN1
Fibrillin 1.
   
 0.687
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
   
 0.683
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.