STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOC2BDouble C2 domain beta. (356 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.662
RAB3A
RAB3A, member RAS oncogene family.
   
 
 0.650
RAB3C
RAB3C, member RAS oncogene family.
   
 
 0.650
RAB3B
RAB3B, member RAS oncogene family.
   
 
 0.650
Rab13
Uncharacterized protein.
    
 
 0.582
RPH3AL
Rabphilin 3A like (without C2 domains).
 
    
 0.546
RAB3D
RAB3D, member RAS oncogene family.
   
 
 0.509
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.486
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.486
UNC13C
Unc-13 homolog C.
   
 
 0.472
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.