STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A4Solute carrier family 27 member 4. (643 aa)    
Predicted Functional Partners:
Bbs1
BBS1 domain-containing protein.
   
 0.909
BBS7
Bardet-Biedl syndrome 7.
    
 0.907
BBS9
Bardet-Biedl syndrome 9.
   
 0.905
TTC8
Tetratricopeptide repeat domain 8.
    
 0.885
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.881
BBS4
Bardet-Biedl syndrome 4.
    
 0.873
SLC27A1
Solute carrier family 27 member 1.
  
  
0.853
SLC27A5
Solute carrier family 27 member 5.
  
  
 
0.845
SLC27A6
Solute carrier family 27 member 6.
  
  
 
0.809
SLC27A2
Solute carrier family 27 member 2.
  
  
 
0.775
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.