STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC11Collectin subfamily member 11. (272 aa)    
Predicted Functional Partners:
COLEC10
Collectin subfamily member 10.
  
0.963
MASP1
Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.
    
 0.937
COLEC12
Collectin subfamily member 12.
    
0.857
LOC101977784
C-type lectin domain-containing protein.
  
  
 
0.848
MASP2
Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.
    
 0.823
I3N0Y5_ICTTR
C-type lectin domain-containing protein.
   
 
0.792
Clec4f
C-type lectin domain-containing protein.
     
 0.784
CD207
CD207 molecule.
     
0.784
C1R
Complement C1r; Belongs to the peptidase S1 family.
    
 0.775
C1S
Complement C1s; Belongs to the peptidase S1 family.
    
 0.775
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.