STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HECAHdc homolog, cell cycle regulator. (464 aa)    
Predicted Functional Partners:
CCR7
C-C motif chemokine receptor 7; Belongs to the G-protein coupled receptor 1 family.
      
 0.613
HAS2
Hyaluronan synthase 2.
   
  
 0.511
SELE
Selectin E.
      
 0.468
MGAT5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
      
 0.465
SELP
Selectin P.
      
 0.457
SNX20
Sorting nexin 20.
   
  
 0.454
FUT7
Fucosyltransferase 7.
      
 0.437
CD19
CD19 molecule.
      
 0.435
HAS3
Hyaluronan synthase 3.
   
  
 0.427
OSGEP
O-sialoglycoprotein endopeptidase.
      
 0.412
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.