STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR47WD repeat domain 47. (921 aa)    
Predicted Functional Partners:
CAMSAP3
Calmodulin regulated spectrin associated protein family member 3.
 
 
 
 0.917
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
 
 
 
 0.811
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
 
  
 
 0.634
FBXO33
F-box protein 33.
      
 0.583
I3MH86_ICTTR
Uncharacterized protein.
      
 0.570
WDR63
WD repeat domain 63.
      
 0.495
CNOT6
CCR4-NOT transcription complex subunit 6.
      
 0.485
NOS1AP
Nitric oxide synthase 1 adaptor protein.
      
 0.452
NME6
NME/NM23 nucleoside diphosphate kinase 6; Belongs to the NDK family.
      
 0.422
WDR37
WD repeat domain 37.
      
 0.422
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.