STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3N4L1_ICTTRUncharacterized protein. (178 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
   0.917
SPAG17
Sperm associated antigen 17.
    
 
 0.807
CCDC189
Coiled-coil domain containing 189.
    
 
 0.766
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.765
LRRC72
Leucine rich repeat containing 72.
    
   0.765
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.765
INO80
INO80 complex ATPase subunit.
    
 
 0.632
HLTF
Helicase like transcription factor.
    
 
 0.632
I3M9Y4_ICTTR
Calponin-homology (CH) domain-containing protein.
   
   0.600
CALML6
Calmodulin like 6.
    
 
 0.582
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.