STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3N4N8_ICTTRUncharacterized protein. (175 aa)    
Predicted Functional Partners:
Cdk12
Protein kinase domain-containing protein.
    
 
 0.657
CDK13
Cyclin dependent kinase 13.
    
 
 0.657
HMCN1
Hemicentin 1.
    
 
 0.505
VSIG10L2
V-set and immunoglobulin domain containing 10 like 2.
    
 
 0.464
CCNQ
Cyclin Q; Belongs to the cyclin family.
   
 
 0.462
CCNT2
Cyclin T2; Belongs to the cyclin family.
   
 
 0.462
CCNT1
Cyclin T1; Belongs to the cyclin family.
   
 
 0.462
CCNK
Cyclin K; Belongs to the cyclin family.
   
 
 0.462
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.427
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.