STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35D3Solute carrier family 35 member D3. (423 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 
 0.646
PNKD
PNKD metallo-beta-lactamase domain containing.
      
 0.600
SLC35A3
Solute carrier family 35 member A3.
   
  
 0.594
RNF6
Ring finger protein 6.
      
 0.568
LARP6
La ribonucleoprotein domain family member 6.
      
 0.561
LYPLAL1
Lysophospholipase like 1.
      
 0.554
I3MU06_ICTTR
Uncharacterized protein.
   
  
 0.503
SLC35B4
Solute carrier family 35 member B4.
      
 0.499
IGF2BP2
Insulin like growth factor 2 mRNA binding protein 2.
      
 0.493
SLC30A8
Solute carrier family 30 member 8.
   
  
 0.482
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.