STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MC4RMelanocortin 4 receptor. (333 aa)    
Predicted Functional Partners:
POMC
Proopiomelanocortin.
    
 0.995
LOC101967288
Uncharacterized protein.
    
 0.976
GNAL
G protein subunit alpha L.
    
 0.961
GNB1
G protein subunit beta 1.
    
 0.919
GNB4
G protein subunit beta 4.
    
 0.899
MC5R
Melanocortin 5 receptor.
  
  
0.877
MC2R
Melanocortin 2 receptor.
  
 
0.876
MC3R
Melanocortin 3 receptor.
  
 
0.857
AVP
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
   
 0.854
GNB2
G protein subunit beta 2.
    
 0.840
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.