STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101954721Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (188 aa)    
Predicted Functional Partners:
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.689
INPPL1
Inositol polyphosphate phosphatase like 1.
   
 
 0.661
MOB1A
MOB kinase activator 1A.
    
 0.585
GAK
Cyclin G associated kinase.
    
 0.560
SORL1
Sortilin related receptor 1.
    
  0.547
ESPL1
Extra spindle pole bodies like 1, separase.
    
 0.541
LATS1
Large tumor suppressor kinase 1.
    
  0.504
LATS2
Large tumor suppressor kinase 2.
    
  0.504
RNASEL
Uncharacterized protein.
   
 0.498
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.498
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.