STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKAP17AA-kinase anchoring protein 17A. (444 aa)    
Predicted Functional Partners:
NLGN1
Neuroligin 1.
      
 0.711
SH3RF3
SH3 domain containing ring finger 3.
      
 0.618
Asmtl
Uncharacterized protein.
      
 0.618
AMELX
Amelogenin X-linked.
      
 0.611
ENSSTOP00000029284
Ribosomal_L30 domain-containing protein.
      
 0.603
MITD1
Microtubule interacting and trafficking domain containing 1.
      
 0.601
TMEM121
Transmembrane protein 121.
      
 0.600
PGLYRP2
Peptidoglycan recognition protein 2.
      
 0.590
NLGN3
Neuroligin 3.
      
 0.585
NLGN2
Neuroligin 2.
      
 0.584
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.