STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp3Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
CHMP6
Charged multivesicular body protein 6.
    
 0.998
CHMP7
Charged multivesicular body protein 7.
   
 0.995
CHMP4B
Charged multivesicular body protein 4B.
   
 0.994
CHMP1A
Charged multivesicular body protein 1A.
 
 
 0.994
I3NBU5_ICTTR
Uncharacterized protein.
   
 0.993
Chmp2a
Uncharacterized protein.
   
0.993
CHMP4C
Charged multivesicular body protein 4C.
   
 0.991
ENSSTOP00000027807
Uncharacterized protein.
   
 0.989
Tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.987
CHMP2B
Charged multivesicular body protein 2B.
   
0.984
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.