STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA3PTPRF interacting protein alpha 3. (1194 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.991
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.976
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.962
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.926
PPFIBP2
PPFIA binding protein 2.
   
0.900
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.896
PPP2CA
Serine/threonine-protein phosphatase.
    
   0.808
Ppp2cb
Serine/threonine-protein phosphatase.
    
   0.808
ENSSTOP00000027631
SER_THR_PHOSPHATASE domain-containing protein.
    
   0.808
RIMS3
Regulating synaptic membrane exocytosis 3.
   
 0.757
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.