STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRZ1Protein tyrosine phosphatase receptor type Z1. (2277 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 
 0.959
PTN
Pleiotrophin.
   
 0.952
MDK
Midkine.
    
 0.898
IL34
Interleukin 34.
    
 0.889
PTPRR
Protein tyrosine phosphatase receptor type R.
    
0.821
PTPN7
Protein tyrosine phosphatase non-receptor type 7.
    
0.821
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
    
0.821
MAPK7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.758
MAPK3
Mitogen-activated protein kinase.
    
 0.758
MAPK1
Mitogen-activated protein kinase.
    
 0.758
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.