STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX1Regulatory factor X1. (972 aa)    
Predicted Functional Partners:
CHEK2
Checkpoint kinase 2.
    
 0.925
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.912
RFXAP
Regulatory factor X associated protein.
    
 0.876
RFXANK
Regulatory factor X associated ankyrin containing protein.
    
 0.847
I3MEP9_ICTTR
Uncharacterized protein.
    
 0.699
FOXJ2
Forkhead box J2.
    
 
 0.688
ANKRA2
Ankyrin repeat family A member 2.
    
 0.661
CREB1
cAMP responsive element binding protein 1.
   
 
 0.640
DCLK1
Doublecortin like kinase 1.
     
 0.626
PAX6
Paired box 6.
      
 0.610
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.