STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBX4Chromobox 4. (555 aa)    
Predicted Functional Partners:
LOC101955676
RING-type domain-containing protein.
    
 0.987
CBX8
Chromobox 8.
    
0.985
RING1
Ring finger protein 1.
    
 0.985
PCGF2
Polycomb group ring finger 2.
    
 0.981
PHC2
Polyhomeotic homolog 2.
    
 0.953
CBX2
Chromobox 2.
    
0.953
Rnf2
RING-type domain-containing protein.
    
 0.949
ENSSTOP00000028844
Uncharacterized protein.
    
 0.949
PHC3
Polyhomeotic homolog 3.
    
 0.927
PHC1
Polyhomeotic homolog 1.
    
 0.926
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.