STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTNPleiotrophin. (142 aa)    
Predicted Functional Partners:
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
   
 0.952
ALK
Tyrosine-protein kinase receptor.
    
 0.919
LTK
Tyrosine-protein kinase receptor.
    
 0.875
ROS1
Tyrosine-protein kinase receptor.
    
 0.808
MST1R
Macrophage stimulating 1 receptor.
    
 0.793
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.793
PTPRB
Protein tyrosine phosphatase receptor type B.
   
 0.787
MDK
Midkine.
    
0.778
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 
 0.677
FER
Tyrosine-protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. Fes/fps subfamily.
    
 0.676
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.