STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYBRD1Cytochrome b reductase 1. (284 aa)    
Predicted Functional Partners:
CDYL
Chromodomain Y like.
    
   0.634
MIER1
MIER1 transcriptional regulator.
    
   0.604
SLC11A2
Solute carrier family 11 member 2.
      
 0.601
SLC40A1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
      
 0.589
HAMP
Hepcidin antimicrobial peptide.
      
 0.572
MIER2
MIER family member 2.
    
   0.563
CDYL2
Chromodomain Y like 2.
    
   0.563
HFE
Homeostatic iron regulator; Belongs to the MHC class I family.
      
 0.558
HEPH
Hephaestin; Belongs to the multicopper oxidase family.
      
 0.478
TFRC
Transferrin receptor.
      
 0.457
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.