STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF21TNF receptor superfamily member 21. (654 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.963
APLP2
Amyloid beta precursor like protein 2.
    
 
 0.836
TRADD
TNFRSF1A associated via death domain.
    
 
 0.725
APLP1
Amyloid beta precursor like protein 1.
    
 
 0.685
HHIP
Hedgehog interacting protein.
    
 
 0.616
CASP6
Caspase 6; Belongs to the peptidase C14A family.
      
 0.507
LOC101954665
C-X-C motif chemokine.
  
     0.433
CFAP45
Cilia and flagella associated protein 45.
      
 0.432
PLA2G4A
Phospholipase A2.
      
 0.428
Faslg
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
      
 0.426
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.