STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP77Cilia and flagella associated protein 77. (284 aa)    
Predicted Functional Partners:
SPACA9
Sperm acrosome associated 9.
   
 
 0.817
CCDC173
Coiled-coil domain containing 173.
    
 
 0.800
C5orf49
Chromosome 5 open reading frame 49.
   
   0.789
C9orf116
Chromosome 9 open reading frame 116.
   
   0.784
EFHC1
EF-hand domain containing 1.
   
   0.781
EFHC2
EF-hand domain containing 2.
   
   0.781
ENKUR
Enkurin, TRPC channel interacting protein.
   
   0.774
C1orf158
Chromosome 1 open reading frame 158.
   
   0.774
C11orf1
Chromosome 11 open reading frame 1.
   
   0.774
C1orf194
Chromosome 1 open reading frame 194.
   
   0.774
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.