STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NWD2NACHT and WD repeat domain containing 2. (1742 aa)    
Predicted Functional Partners:
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.789
Bub1b
Uncharacterized protein.
   
 0.773
TAF12
TATA-box binding protein associated factor 12.
   
 0.771
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.770
TAF2
TATA-box binding protein associated factor 2.
    
 0.770
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.769
Taf1
Transcription initiation factor TFIID subunit.
    
 0.769
CDC16
Cell division cycle 16.
   
 0.763
IFT140
Intraflagellar transport 140.
    
 0.762
WDR19
WD repeat domain 19.
    
 0.761
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.