STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM131CFamily with sequence similarity 131 member C. (261 aa)    
Predicted Functional Partners:
NIPAL3
NIPA like domain containing 3.
      
 0.567
HPCAL4
Hippocalcin like 4.
    
   0.564
TMEM82
Transmembrane protein 82.
  
   
 0.553
ZBTB40
Zinc finger and BTB domain containing 40.
      
 0.548
Man1c1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.541
CCDC120
Coiled-coil domain containing 120.
  
   
 0.431
NIPAL2
NIPA like domain containing 2.
      
 0.416
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.