STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA25Spermatogenesis associated 25. (228 aa)    
Predicted Functional Partners:
PHIP
Pleckstrin homology domain interacting protein.
    
 
 0.597
NEURL2
Neuralized E3 ubiquitin protein ligase 2.
   
  
 0.531
NEURL1
Neuralized E3 ubiquitin protein ligase 1.
   
  
 0.473
NEURL1B
Neuralized E3 ubiquitin protein ligase 1B.
   
  
 0.473
IRAK1BP1
Interleukin 1 receptor associated kinase 1 binding protein 1.
      
 0.463
ACSS3
Acyl-CoA synthetase short chain family member 3.
      
 0.414
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.410
ACOT8
Acyl-CoA thioesterase 8.
      
 0.410
SPATA46
Spermatogenesis associated 46.
      
 0.410
FRAS1
Fraser extracellular matrix complex subunit 1.
      
 0.410
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.