STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP35Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. (1007 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.951
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
    
   0.908
DMWD
DM1 locus, WD repeat containing.
    
 0.873
WDR20
WD repeat domain 20.
    
 0.873
Rps27a
Ubiquitin-like domain-containing protein.
    
 0.870
LOC101966763
Ubiquitin-like domain-containing protein.
    
 0.870
ENSSTOP00000031366
Ubiquitin-like domain-containing protein.
    
 0.870
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.837
ENSSTOP00000028703
Ubiquitin-like domain-containing protein.
    
 0.837
FANCD2
FA complementation group D2.
    
 0.796
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.