STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAM29ADAM metallopeptidase domain 29. (773 aa)    
Predicted Functional Partners:
ADAM18
ADAM metallopeptidase domain 18.
  
 
0.626
ADAM2
ADAM metallopeptidase domain 2.
  
 
0.610
I3N1G4_ICTTR
Peptidase M12B domain-containing protein.
    
0.587
ENSSTOP00000028778
Uncharacterized protein.
    
 0.587
SH3PXD2A
SH3 and PX domains 2A.
    
 0.587
LGI1
Leucine rich glioma inactivated 1.
    
 0.543
SH3PXD2B
SH3 and PX domains 2B.
    
 0.507
ADAM21
ADAM metallopeptidase domain 21.
  
  
 
0.501
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
  0.482
RASA1
RAS p21 protein activator 1.
    
  0.456
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.