Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DOHH | ISCA1 | ENSSTOP00000021504 | ENSSTOP00000000526 | Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. | Iron-sulfur cluster assembly 1. | 0.790 |
DOHH | ISCA2 | ENSSTOP00000021504 | ENSSTOP00000022135 | Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. | Iron-sulfur cluster assembly 2. | 0.790 |
FDX1 | GLRX3 | ENSSTOP00000003319 | ENSSTOP00000014557 | Ferredoxin 1. | Glutaredoxin 3. | 0.458 |
FDX1 | I3MPJ3_ICTTR | ENSSTOP00000003319 | ENSSTOP00000013721 | Ferredoxin 1. | Aminotran_5 domain-containing protein. | 0.954 |
FDX1 | IBA57 | ENSSTOP00000003319 | ENSSTOP00000021973 | Ferredoxin 1. | Iron-sulfur cluster assembly factor IBA57. | 0.462 |
FDX1 | ISCA1 | ENSSTOP00000003319 | ENSSTOP00000000526 | Ferredoxin 1. | Iron-sulfur cluster assembly 1. | 0.716 |
FDX1 | ISCA2 | ENSSTOP00000003319 | ENSSTOP00000022135 | Ferredoxin 1. | Iron-sulfur cluster assembly 2. | 0.706 |
FDX1 | ISCU | ENSSTOP00000003319 | ENSSTOP00000002142 | Ferredoxin 1. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.965 |
FDX1 | NFU1 | ENSSTOP00000003319 | ENSSTOP00000012072 | Ferredoxin 1. | NFU1 iron-sulfur cluster scaffold. | 0.598 |
FDX1 | SCLY | ENSSTOP00000003319 | ENSSTOP00000012594 | Ferredoxin 1. | Selenocysteine lyase. | 0.926 |
GLRX3 | FDX1 | ENSSTOP00000014557 | ENSSTOP00000003319 | Glutaredoxin 3. | Ferredoxin 1. | 0.458 |
GLRX3 | I3MPJ3_ICTTR | ENSSTOP00000014557 | ENSSTOP00000013721 | Glutaredoxin 3. | Aminotran_5 domain-containing protein. | 0.739 |
GLRX3 | IBA57 | ENSSTOP00000014557 | ENSSTOP00000021973 | Glutaredoxin 3. | Iron-sulfur cluster assembly factor IBA57. | 0.610 |
GLRX3 | ISCA1 | ENSSTOP00000014557 | ENSSTOP00000000526 | Glutaredoxin 3. | Iron-sulfur cluster assembly 1. | 0.919 |
GLRX3 | ISCA2 | ENSSTOP00000014557 | ENSSTOP00000022135 | Glutaredoxin 3. | Iron-sulfur cluster assembly 2. | 0.897 |
GLRX3 | ISCU | ENSSTOP00000014557 | ENSSTOP00000002142 | Glutaredoxin 3. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.713 |
GLRX3 | MOCOS | ENSSTOP00000014557 | ENSSTOP00000009897 | Glutaredoxin 3. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.769 |
GLRX3 | NFU1 | ENSSTOP00000014557 | ENSSTOP00000012072 | Glutaredoxin 3. | NFU1 iron-sulfur cluster scaffold. | 0.790 |
GLRX3 | SCLY | ENSSTOP00000014557 | ENSSTOP00000012594 | Glutaredoxin 3. | Selenocysteine lyase. | 0.673 |
I3MPJ3_ICTTR | FDX1 | ENSSTOP00000013721 | ENSSTOP00000003319 | Aminotran_5 domain-containing protein. | Ferredoxin 1. | 0.954 |
page 1 of 5