STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS7BCOP9 signalosome subunit 7B. (264 aa)    
Predicted Functional Partners:
COPS3
COP9 signalosome subunit 3.
    
 0.994
COPS4
COP9 signalosome subunit 4.
   
 0.994
GPS1
G protein pathway suppressor 1.
  
 0.994
COPS2
COP9 signalosome subunit 2.
    
 0.993
COPS5
COP9 signalosome subunit 5.
    
 0.992
COPS6
COP9 signalosome subunit 6.
    
 0.992
COPS8
COP9 signalosome subunit 8.
    
 0.992
PPP1R42
Protein phosphatase 1 regulatory subunit 42.
    
 0.968
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.955
COPS7A
COP9 signalosome subunit 7A.
  
 
0.950
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.