STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA2LSpermatogenesis associated 2 like. (425 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.866
SHARPIN
SHANK associated RH domain interactor.
    
  0.850
RBCK1
RANBP2-type and C3HC4-type zinc finger containing 1.
    
  0.850
SPATA2
Spermatogenesis associated 2.
     
0.840
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.730
VPS9D1
VPS9 domain containing 1.
 
      0.702
RANBP2
RAN binding protein 2.
    
 0.634
I3M5T4_ICTTR
DUF4062 domain-containing protein.
    
 0.612
TEP1
Telomerase associated protein 1.
    
 0.612
I3MHF1_ICTTR
Uncharacterized protein.
    
  0.612
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.