STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPZMyelin protein zero. (248 aa)    
Predicted Functional Partners:
OPALIN
Oligodendrocytic myelin paranodal and inner loop protein.
      
 0.587
NRG1
Neuregulin 1.
      
 0.576
PLP1
Proteolipid protein 1.
   
  
 0.464
VEGFA
Vascular endothelial growth factor A; Belongs to the PDGF/VEGF growth factor family.
  
     0.459
YARS1
Tyrosine--tRNA ligase.
      
 0.447
EGR2
Early growth response 2.
      
 0.436
OPRK1
Opioid receptor kappa 1; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.420
GDAP1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.418
GJB1
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.416
PRX
Periaxin.
      
 0.412
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.