STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBNL1Muscleblind like splicing regulator 1. (387 aa)    
Predicted Functional Partners:
CELF1
CUGBP Elav-like family member 1.
   
 
 0.715
QKI
QKI, KH domain containing RNA binding.
   
 
 0.632
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 
 0.631
CELF2
CUGBP Elav-like family member 2.
    
 
 0.595
CLCN1
Chloride channel protein.
      
 0.582
Srsf1
Uncharacterized protein.
   
 
 0.566
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.561
DHX9
DExH-box helicase 9.
   
 
 0.551
RBFOX2
RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events.
    
 
 0.520
RBFOX1
RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events.
    
 
 0.504
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.