STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB1Potassium voltage-gated channel subfamily A member regulatory beta subunit 1. (385 aa)    
Predicted Functional Partners:
KCNA1
Potassium voltage-gated channel subfamily A member 1; Belongs to the potassium channel family.
   
 0.889
KCNA4
Potassium voltage-gated channel subfamily A member 4; Belongs to the potassium channel family.
   
 0.854
KCNA2
Potassium voltage-gated channel subfamily A member 2; Belongs to the potassium channel family.
   
 0.854
ENSSTOP00000025283
Uncharacterized protein; Belongs to the potassium channel family.
   
 0.844
ENSSTOP00000030023
BTB domain-containing protein; Belongs to the potassium channel family.
   
 0.844
NUP133
Nucleoporin 133.
   
 0.842
KCNA6
Potassium voltage-gated channel subfamily A member 6; Belongs to the potassium channel family.
   
 0.841
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.836
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.825
KCNG4
Potassium voltage-gated channel modifier subfamily G member 4; Belongs to the potassium channel family.
    
 0.809
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.