STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAT1T cell receptor associated transmembrane adaptor 1. (186 aa)    
Predicted Functional Partners:
ICOS
Inducible T cell costimulator.
  
  
 0.834
CD247
CD247 molecule.
   
 0.778
TESPA1
Thymocyte expressed, positive selection associated 1.
   
  
 0.638
LAX1
Lymphocyte transmembrane adaptor 1.
   
  
 0.610
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.606
Ubash3a
Uncharacterized protein.
   
  
 0.603
UBASH3B
Ubiquitin associated and SH3 domain containing B.
   
  
 0.603
CD3D
CD3d molecule.
   
 
 0.535
IFT57
Intraflagellar transport 57.
      
 0.530
MRPS23
Mitochondrial ribosomal protein S23.
      
 0.522
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.