STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACC1Proton activated chloride channel 1. (350 aa)    
Predicted Functional Partners:
Nenf
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
      
 0.562
MANSC1
MANSC domain containing 1.
      
 0.542
LOC101955529
Uncharacterized protein.
      
 0.493
TMEM171
Transmembrane protein 171.
      
 0.489
JADE1
Jade family PHD finger 1.
      
 0.450
LMLN
Leishmanolysin-like peptidase.
  
     0.435
FAM189A1
Family with sequence similarity 189 member A1.
      
 0.432
EDRF1
Erythroid differentiation regulatory factor 1.
      
 0.412
CAMKK2
Calcium/calmodulin dependent protein kinase kinase 2.
      
 0.412
CAMKK1
Calcium/calmodulin dependent protein kinase kinase 1.
      
 0.412
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.