STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IkbkeProtein kinase domain-containing protein. (130 aa)    
Predicted Functional Partners:
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.996
TBK1
TANK binding kinase 1.
    
0.995
TANK
TRAF family member associated NFKB activator.
   
 0.993
STING1
Transmembrane protein 173.
   
 0.989
IRF3
Interferon regulatory factor 3.
   
 0.986
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.983
TRAF2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.979
MAVS
Mitochondrial antiviral signaling protein.
    
 0.979
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.976
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.974
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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