STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHTF1Putative homeodomain transcription factor 1. (765 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.907
MSL2
MSL complex subunit 2.
    
 0.848
S100A10
S100 calcium binding protein A10; Belongs to the S-100 family.
    
 0.785
RSBN1
Round spermatid basic protein 1.
 
    
 0.768
MAML1
Mastermind like transcriptional coactivator 1.
    
 0.732
NCSTN
Nicastrin.
    
 0.727
NXF1
Nuclear RNA export factor 1.
    
 0.724
LOC101973495
Uncharacterized protein.
    
 0.724
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.700
KAT6A
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.700
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.