STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIGA2Mitoguardin 2. (593 aa)    
Predicted Functional Partners:
MIGA1
Mitoguardin 1.
  
 
 
0.928
DPM3
Dolichol-phosphate mannosyltransferase subunit 3; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER. Belongs to the DPM3 family.
     
 0.775
NEXN
Nexilin F-actin binding protein.
 
  
  0.763
TUSC3
Tumor suppressor candidate 3.
   
 
  0.761
SURF6
Surfeit 6.
     
 0.698
MAGT1
Magnesium transporter 1.
   
 
  0.611
PLD6
Phospholipase D family member 6.
    
 
 0.513
VAPA
VAMP associated protein A.
    
 
 0.506
VAPB
VAMP associated protein B and C.
    
 
 0.480
FOXRED1
FAD dependent oxidoreductase domain containing 1.
   
  
 0.473
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.