STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2IRD1GTF2I repeat domain containing 1. (1026 aa)    
Predicted Functional Partners:
GTF2I
General transcription factor IIi.
     
0.842
I3MGY8_ICTTR
AGC-kinase C-terminal domain-containing protein.
     
 0.839
PRKG1
cGMP-dependent protein kinase.
     
 0.839
CLIP2
CAP-Gly domain containing linker protein 2.
 
    
 0.638
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
      
 0.528
NSUN5
NOP2/Sun RNA methyltransferase 5; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.501
RFC2
Replication factor C subunit 2.
      
 0.480
TBL2
Transducin beta like 2.
      
 0.459
PDE6C
Phosphodiesterase.
      
 0.450
CNGA3
Cyclic nucleotide gated channel subunit alpha 3.
      
 0.450
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.