STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNIH4Cornichon family AMPA receptor auxiliary protein 4. (139 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.895
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.887
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.884
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.852
TMED2
Transmembrane p24 trafficking protein 2.
    
 0.823
Tmed10
GOLD domain-containing protein.
   
 0.801
LOC101963008
GOLD domain-containing protein.
   
 0.801
GORASP1
Golgi reassembly stacking protein 1.
   
 0.798
GORASP2
Golgi reassembly stacking protein 2.
   
 0.756
STX5
Syntaxin 5.
    
 0.752
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.